Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944327.1_cds_XP_016487191.1_77954
CDS Infomation

[gene=LOC107807348] [db_xref=GeneID:107807348] [protein=vacuolar-processing enzyme-like] [protein_id=XP_016487191.1] [location=join(19356..19565,24206..24442,24543..24699,24857..24942,25034..25257,25592..25640,25740..25955,26046..26252,26365..26502)] [gbkey=CDS]
Sequence

ATGACTCCGAAGTGGATTGAATCGAGGCACGAAGACAAGGTACCGAGATCGAGATTCGAG
GCACTTGCCAAGATCGAGGCCGACCGCAATCGAGACCAAATGAGACAGGCATCGAGCAAT
ACCGAAGATAGCGTAATAACGGAAAGGCGAGATATCCGTGACTGGTCGAAGATCATGGCG
GAAATCTTGGAACGGATCGAATCAAGAACGTCCACCCCGAGCAACATAGCTGGGTGGGCA
GGTGGCAAAGAGAATCTGAGTGTTATTCCTTACATATTTCAGGCTGATGTATGTCATGCT
TACCAATTACTAAAGGATGGAGGTCTAAAAGATGAAAACATCATCGTATTCATGTACGAT
GATATTGCTAACAATAGAGAGAACCCCAGACCTGGAGTCATTATCAATAACCCACATGGC
CATGATGTTTACAAAGGTGTCCCCAAGGATTATGTGCTTGAAGATGTTAATGCCAACAAT
TTTTACAATGTTATCCTTGGCAACAAAAGCGCTGTAGTTGGGGGCAGTGGGAAAGTAGTG
AACAGTGGTCCAAATGACCATATCTTCATCTATTATACTGATCATGGCGGCCCTGGTGTA
GTTTCAATGCCAAGTGGAGAAGATGTTTACGCTAATGATCTGATTGATGTGTTGAAAAAG
AAGCATGCTTCAGGGACATATGACAGACTGGTGTTTTATTTAGAAGCTTGTGAGTCCGGA
AGCATGTTTGATGGTCTTCTCCCTGAAGGTCTAGACATATATGTCATGACTGCATCAGAA
CCTAATGAAGATAGTTGGGCGACGTATTGTGGTGAGGGTACTCCTGATTATCCCTGCTTG
GTTGAGTGTCCCCCTCCCGAGTTTCAGGGTGTGTGCTTGGGAGATTTGTACAGTGTTGCC
TGGATGGAAGATAGCGATGTAACAGATCGAGATGCTGACAGTGTGCAAGGGCAGCATAGC
CGAGTTGCAAACAGAACTGCAGCTAACATAACATATGGCGGCTATGGCTCCCATGTCACA
GAATACGGTGATATAGTGGTGAGCTTTGATCGACTTTCCACATATATGGGTGAAGCTTCC
ACAAACCACAGTCATGCCTCTGTGAATGCTATGTCATTCTCGACATCATCAAAGAGTGTG
GATCAATACAGTGCTGAACTTTTCTATTTGTTCACCAAACACCAAAATGCTCCTGAAGGG
TCTCATGAGAAGTTTGAAGCTCACGCGAGACTTAAAGAAGCTATATCACAGAGAACTCAA
GTGGACAACAGTGTAAAACATCTTGGGGAGCTTCTTTTTGGTGTTGAAAAAGGTAATGAG
GTACTACACAGTGTTCGACCTGCTGGACAACCACTTGTTGACAGCTGGGATTGCCTTAAG
TCCTACGTCAACATATTTGAGGCACATTGTGGAATATTAAGCTCGTATGGAAAGAAACAC
ATACGTGGTATAGCCAACATCTGCAATGCTGGAATTACGAGTGAACAAATGGCTTCTACA
TCTGCACAAGCATGTTCAAGTTAG

Peptide Sequence

PEP ID

XP_016487191.1
PEP Infomation

PREDICTED: vacuolar-processing enzyme-like [Nicotiana tabacum]
Sequence

MTPKWIESRHEDKVPRSRFEALAKIEADRNRDQMRQASSNTEDSVITERRDIRDWSKIMA
EILERIESRTSTPSNIAGWAGGKENLSVIPYIFQADVCHAYQLLKDGGLKDENIIVFMYD
DIANNRENPRPGVIINNPHGHDVYKGVPKDYVLEDVNANNFYNVILGNKSAVVGGSGKVV
NSGPNDHIFIYYTDHGGPGVVSMPSGEDVYANDLIDVLKKKHASGTYDRLVFYLEACESG
SMFDGLLPEGLDIYVMTASEPNEDSWATYCGEGTPDYPCLVECPPPEFQGVCLGDLYSVA
WMEDSDVTDRDADSVQGQHSRVANRTAANITYGGYGSHVTEYGDIVVSFDRLSTYMGEAS
TNHSHASVNAMSFSTSSKSVDQYSAELFYLFTKHQNAPEGSHEKFEAHARLKEAISQRTQ
VDNSVKHLGELLFGVEKGNEVLHSVRPAGQPLVDSWDCLKSYVNIFEAHCGILSSYGKKH
IRGIANICNAGITSEQMASTSAQACSS

Transcript Sequence

Gene sequence data has not been registered.